Table 1 Overview of the metrics implemented in this tool

Dice (=F1-Measure)

DICE

[1, 2, 15, 16, 57–63]

1

(6)

Jaccard index

JAC

[15, 16, 21–23, 59, 60, 62]

1

(7)

True positive rate (Sensitivity, Recall)

TPR

[10, 16, 60, 62–64]

1

(10)

True negative rate (Specificity)

TNR

[10, 16, 60, 62]

1

(11)

False positive rate (=1-Specificity, Fallout)

FPR

→ Specificity

1

(12)

False negative rate (=1-Sensitivity)

FNR

→ Sensitivity

1

(13)

F-Measure (F1-Measure=Dice)

FMS

→ Dice

1

(15), (16)

Global Consistency Error

GCE

[21–23, 65, 66]

1

(17) to (19)

Volumetric Similarity

VS

[15, 21–23, 59, 61, 67]

2

(21)

Rand Index

RI

[21, 22, 65, 66]

3

(30)

Adjusted Rand Index

ARI

[68, 69]

3

(32)

Mutual Information

MI

[2, 32, 57]

4

(33) to (38)

Variation of Information

VOI

[21, 22, 65, 66]

4

(39), (35)

Interclass correlation

ICC

[8, 70]

5

(41)

Probabilistic Distance

PBD

[8, 59]

5

(43)

Cohens kappa

KAP

[1, 62]

5

(44) to (46)

Area under ROC curve

AUC

[2, 64, 69]

5

(47)

Hausdorff distance

HD

[8, 15, 59, 61–63, 71, 72]

6

(48), (49)

Average distance

AVD

[62, 63]

6

(50), (51)

Mahalanobis Distance

MHD

[15, 73]

6

(52) to (54)